Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_902

Experiments: YNB Ricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_901: 9269 - SUPERFAMILY--SSF52266, at 2149228 to 2151284 9269 mRNA_902: 9270 - KOG2398 Predicted proline-serine-threonine phosphatase-interacting protein (PSTPIP), at 2151634 to 2155672 9270 mRNA_903: 9271 - Hypothetical Protein, at 2155958 to 2156725 9271

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
remove
2,150,894 + 9269 mRNA_901 0.81 -1.5
2,151,015 - 9269 mRNA_901 0.87 0.7
2,151,022 - 9269 mRNA_901 0.87 -0.4
2,151,040 - 9269 mRNA_901 0.88 0.4
2,151,079 - 0.4
2,151,331 - 0.5
2,151,345 + -1.0
2,151,356 - -0.7
2,151,374 - -0.1
2,151,404 - 0.3
2,151,415 + -0.3
2,151,445 - 2.4
2,151,525 + 0.2
2,151,620 - -0.3
2,151,627 + 0.2
2,151,799 - -0.0
2,151,811 + -0.0
2,151,812 + -0.6
2,151,857 + 2.0
2,151,978 - 2.0
2,152,007 - -0.0
2,152,081 + 9270 mRNA_902 0.11 -1.2
2,152,395 - 9270 mRNA_902 0.19 -0.4
2,152,404 - 9270 mRNA_902 0.19 1.0
2,152,715 + 9270 mRNA_902 0.27 0.3
2,152,735 - 9270 mRNA_902 0.27 1.3
2,153,718 - 9270 mRNA_902 0.52 -1.1
2,153,922 - 9270 mRNA_902 0.57 -0.6
2,155,485 + 1.5
2,155,681 - -2.6
2,155,769 - -0.3
2,155,914 + 0.3
2,156,047 - 9271 mRNA_903 0.12 0.1
2,156,089 + 9271 mRNA_903 0.17 0.4
2,156,117 + 9271 mRNA_903 0.21 0.8
2,156,356 - 9271 mRNA_903 0.52 0.4
2,156,375 + 9271 mRNA_903 0.54 1.3