Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_899

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_898: 9266 - K14821 BUD20 bud site selection protein 20, at 2143771 to 2144401 9266 mRNA_899: 9267 - K00486 KMO kynurenine 3-monooxygenase, at 2144994 to 2146885 9267 mRNA_900: 9268 - SUPERFAMILY--SSF52266, at 2146982 to 2149051 9268

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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2,144,414 + 0.7
2,144,593 + 0.5
2,144,615 - -1.5
2,144,636 + -0.3
2,144,638 - -1.4
2,144,729 + -0.2
2,144,732 - 0.9
2,144,734 + 1.2
2,144,742 + -0.3
2,144,744 - 0.2
2,144,754 + -0.5
2,144,754 + -0.0
2,145,032 - 1.1
2,145,650 + 9267 mRNA_899 0.35 -0.7
2,145,751 - 9267 mRNA_899 0.40 -1.6
2,145,929 + 9267 mRNA_899 0.49 -0.2
2,146,028 + 9267 mRNA_899 0.55 -0.4
2,146,063 - 9267 mRNA_899 0.57 0.3
2,146,215 + 9267 mRNA_899 0.65 2.0
2,146,744 - -0.8
2,146,772 - -0.4
2,146,807 + 1.7
2,146,934 - 1.1
2,147,033 - 0.4
2,147,092 - 0.1
2,147,191 + 9268 mRNA_900 0.10 -0.6
2,147,382 + 9268 mRNA_900 0.19 1.1
2,147,407 + 9268 mRNA_900 0.21 1.7
2,147,479 - 9268 mRNA_900 0.24 -0.1
2,147,680 + 9268 mRNA_900 0.34 0.6
2,147,745 + 9268 mRNA_900 0.37 -0.7