Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_853

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_852: 9220 - K01923 purC phosphoribosylaminoimidazole-succinocarboxamide synthase, at 2042732 to 2043876 9220 mRNA_853: 9221 - K13125 NOSIP nitric oxide synthase-interacting protein, at 2044185 to 2045369 9221 mRNA_854: 9222 - K01620 ltaE threonine aldolase, at 2045445 to 2046969 9222

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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2,044,018 + 0.1
2,044,128 + -2.2
2,044,138 - -2.9
2,044,288 + 0.0
2,044,420 + 9221 mRNA_853 0.20 0.8
2,044,866 + 9221 mRNA_853 0.57 1.8
2,044,874 + 9221 mRNA_853 0.58 0.4
2,045,028 - 9221 mRNA_853 0.71 0.0
2,045,029 + 9221 mRNA_853 0.71 0.6
2,045,109 + 9221 mRNA_853 0.78 -1.3
2,045,153 + 9221 mRNA_853 0.82 -3.0
2,045,984 + 9222 mRNA_854 0.35 0.3
2,046,038 + 9222 mRNA_854 0.39 0.6
2,046,188 + 9222 mRNA_854 0.49 0.4