Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_844

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_843: 9211 - KOG2262 Sexual differentiation process protein ISP4, at 2019044 to 2022236 9211 mRNA_844: 9212 - KOG1111 N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase, at 2022494 to 2024852 9212 mRNA_845: 9213 - KOG3346 Phosphatidylethanolamine binding protein, at 2025421 to 2026759 9213

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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2,021,740 - 9211 mRNA_843 0.84 1.3
2,021,871 - 9211 mRNA_843 0.89 0.0
2,021,946 - -0.2
2,022,265 + -0.2
2,022,845 + 9212 mRNA_844 0.15 -0.2
2,023,016 - 9212 mRNA_844 0.22 1.1
2,023,020 + 9212 mRNA_844 0.22 -0.2
2,023,375 + 9212 mRNA_844 0.37 -0.2
2,023,614 + 9212 mRNA_844 0.47 -0.8
2,023,747 - 9212 mRNA_844 0.53 -1.8
2,023,858 + 9212 mRNA_844 0.58 0.4
2,024,226 + 9212 mRNA_844 0.73 0.2
2,024,475 - 9212 mRNA_844 0.84 -0.0
2,024,488 + 9212 mRNA_844 0.85 -0.5
2,024,951 + -0.5
2,024,969 + 0.0
2,025,087 - 1.2
2,025,125 - -0.6
2,025,285 + -2.1
2,025,401 - -0.2
2,025,404 - -0.3
2,025,412 + -0.1
2,025,594 - 9213 mRNA_845 0.13 0.0
2,025,852 + 9213 mRNA_845 0.32 0.7