Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_789

Experiments: YNB Ricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_788: 9156 - Hypothetical Protein, at 1872405 to 1873287 9156 mRNA_789: 9157 - K14459 HEX hexosaminidase, at 1873668 to 1877392 9157 mRNA_790: 9158 - HMMPfam-C2 domain-PF00168,ProSiteProfiles-C2 domain profile.-PS50004,SMART-Protein kinase C conserved region 2 (CalB)-SM00239,SUPERFAMILY--SSF49562, at 1877966 to 1880180 9158

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
remove
1,873,240 - 0.0
1,873,366 - 0.8
1,873,426 - 0.1
1,873,521 + -0.1
1,873,534 + -0.0
1,873,537 + -2.6
1,873,537 + -2.5
1,873,539 + 0.3
1,873,553 - -1.1
1,873,554 + 1.8
1,873,612 - -0.6
1,873,635 - -0.3
1,873,635 - 0.2
1,873,636 + -0.4
1,873,638 + -0.8
1,873,641 - 0.5
1,873,648 - -0.1
1,873,795 + -3.8
1,873,809 + 1.0
1,873,918 + 0.2
1,874,057 - 9157 mRNA_789 0.10 0.9
1,874,088 - 9157 mRNA_789 0.11 -0.2
1,874,220 + 9157 mRNA_789 0.15 0.3
1,874,773 - 9157 mRNA_789 0.30 0.9
1,874,953 - 9157 mRNA_789 0.34 0.2
1,875,255 + 9157 mRNA_789 0.43 0.1
1,875,412 + 9157 mRNA_789 0.47 -0.6
1,875,528 + 9157 mRNA_789 0.50 0.7
1,875,683 - 9157 mRNA_789 0.54 0.6
1,876,101 - 9157 mRNA_789 0.65 0.0
1,876,670 + 9157 mRNA_789 0.81 0.5
1,877,135 + 0.5
1,877,254 + -2.8
1,877,291 + 0.7
1,877,399 + -2.7
1,877,452 - -1.1
1,877,718 - -0.1
1,877,740 + 0.3
1,877,874 - 0.3
1,877,879 + 0.7
1,877,880 + 0.2
1,877,880 + -0.2
1,877,889 + 0.4