Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_783

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_783: 9151 - HMMPfam-Magnesium transporter NIPA-PF05653,SUPERFAMILY--SSF103481, at 1864111 to 1866017 9151 mRNA_784: 9152 - HMMPfam-Uncharacterized alpha/beta hydrolase domain (DUF2235)-PF09994, at 1866333 to 1867961 9152

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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1,863,293 - 0.5
1,863,494 + 0.2
1,863,760 - -0.8
1,863,763 - -0.4
1,863,766 - 2.0
1,863,921 - -0.3
1,863,929 + -0.8
1,863,940 + -1.2
1,864,095 + 1.3
1,864,098 - 0.2
1,864,202 - 0.4
1,864,220 + 2.0
1,864,224 - 0.6
1,864,229 - 0.4
1,864,326 + 9151 mRNA_783 0.11 1.0
1,864,965 - 9151 mRNA_783 0.45 1.4
1,865,368 - 9151 mRNA_783 0.66 0.0
1,865,399 + 9151 mRNA_783 0.68 0.2
1,865,798 + 9151 mRNA_783 0.88 -2.0
1,865,810 - 9151 mRNA_783 0.89 1.4
1,865,839 + 0.6
1,865,972 + 1.0
1,866,044 - 2.6
1,866,096 + -0.4
1,866,106 - 0.3
1,866,552 - 9152 mRNA_784 0.13 -0.0
1,866,553 - 9152 mRNA_784 0.14 0.1
1,866,555 - 9152 mRNA_784 0.14 -0.1
1,866,559 + 9152 mRNA_784 0.14 0.4
1,866,974 - 9152 mRNA_784 0.39 -0.3