Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_750

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_749: 9117 - Hypothetical Protein, at 1789709 to 1790560 9117 mRNA_750: 9118 - K12840 RBM17, SPF45 splicing factor 45, at 1790653 to 1793277 9118 mRNA_751: 9119 - K19476 IST1 vacuolar protein sorting-associated protein IST1, at 1793395 to 1794980 9119

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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1,789,823 + 9117 mRNA_749 0.13 -3.7
1,790,511 + -0.4
1,790,532 - -0.3
1,790,986 + 9118 mRNA_750 0.13 0.7
1,790,997 + 9118 mRNA_750 0.13 0.3
1,791,403 - 9118 mRNA_750 0.29 -1.4
1,791,465 + 9118 mRNA_750 0.31 -0.4
1,792,022 - 9118 mRNA_750 0.52 -0.4
1,792,440 + 9118 mRNA_750 0.68 0.3
1,793,006 + 9118 mRNA_750 0.90 -0.8
1,793,299 - -0.2
1,793,338 + -1.0
1,793,460 - 1.3
1,793,462 - 1.9
1,793,475 - -1.3
1,793,564 - 9119 mRNA_751 0.11 -1.4
1,793,602 + 9119 mRNA_751 0.13 -0.2
1,793,614 + 9119 mRNA_751 0.14 -0.2
1,793,629 + 9119 mRNA_751 0.15 0.5
1,793,771 + 9119 mRNA_751 0.24 -1.0
1,794,031 + 9119 mRNA_751 0.40 0.5
1,794,054 - 9119 mRNA_751 0.42 -2.2
1,794,202 + 9119 mRNA_751 0.51 -1.6
1,794,214 + 9119 mRNA_751 0.52 0.0