Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_702

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_701: 9069 - K08776 NPEPPS puromycin-sensitive aminopeptidase, at 1674327 to 1678341 9069 mRNA_702: 9070 - BLAST RAN guanine nucleotide release factor [Moesziomyces a..., at 1678842 to 1679928 9070

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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1,677,904 - 9069 mRNA_701 0.89 0.9
1,677,966 + 2.0
1,678,209 + -1.9
1,678,449 - 1.6
1,678,521 - 2.5
1,678,524 + 0.6
1,678,539 + -0.1
1,678,593 - 0.5
1,678,637 - 0.9
1,678,646 + 0.2
1,678,662 - 0.4
1,678,665 + 0.6
1,678,684 + -1.3
1,678,692 - -1.1
1,678,697 - -0.1
1,678,697 + 0.3
1,678,704 - 1.8
1,678,715 - 1.0
1,678,720 + 0.3
1,678,729 + -0.1
1,678,732 - -0.7
1,678,738 + -0.3
1,678,860 - 0.3
1,679,003 - 9070 mRNA_702 0.15 -1.7
1,679,888 - 1.8
1,679,888 + -0.7
1,680,120 - -0.3
1,680,130 + -1.0
1,680,420 - 0.7
1,680,735 + 1.4
1,680,741 + 0.4
1,680,743 - -0.0
1,680,827 - -0.8
1,680,865 + 2.2
1,680,884 - -1.2
1,680,886 + 0.3