Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_604

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_603: 8971 - Hypothetical Protein, at 1451407 to 1452135 8971 mRNA_604: 8972 - K17871 ndh1 NADH-ubiquinone reductase (non-electrogenic), at 1452523 to 1454931 8972 mRNA_605: 8973 - SUPERFAMILY--SSF52047, at 1455280 to 1456250 8973

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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1,451,548 - 8971 mRNA_603 0.19 -1.7
1,452,168 - -2.2
1,452,176 + -2.7
1,452,322 - -0.1
1,452,341 + -0.4
1,452,350 + 1.6
1,452,472 - -0.0
1,452,753 + 1.8
1,452,796 - 8972 mRNA_604 0.11 -0.2
1,453,168 + 8972 mRNA_604 0.27 3.3
1,454,222 + 8972 mRNA_604 0.71 -1.0
1,454,317 + 8972 mRNA_604 0.74 1.5
1,454,358 + 8972 mRNA_604 0.76 0.7
1,454,503 + 8972 mRNA_604 0.82 1.7
1,454,615 - 8972 mRNA_604 0.87 -4.4
1,454,790 - 1.6
1,454,803 - 0.5
1,454,967 - -1.5
1,454,972 + 0.5
1,454,983 + 0.7
1,455,006 - -0.7
1,455,007 + 0.4
1,455,012 - -0.2
1,455,102 - 0.6
1,455,113 + 2.8
1,455,149 - 0.4
1,455,209 - 0.7
1,455,224 - 0.6
1,455,243 + -0.1
1,455,246 - 1.3
1,455,281 + 0.5
1,455,407 - 8973 mRNA_605 0.13 0.9
1,455,507 + 8973 mRNA_605 0.23 3.5
1,455,534 - 8973 mRNA_605 0.26 0.5
1,455,728 + 8973 mRNA_605 0.46 0.6