Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_591

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_590: 8958 - K05543 DUS2 tRNA-dihydrouridine synthase 2, at 1414639 to 1416336 8958 mRNA_591: 8959 - K01915 glnA, GLUL glutamine synthetase, at 1416451 to 1418413 8959 mRNA_592: 8960 - K10747 LIG1 DNA ligase 1, at 1418540 to 1422145 8960

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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1,416,242 - -1.0
1,416,854 - 8959 mRNA_591 0.21 0.3
1,416,956 - 8959 mRNA_591 0.26 -0.3
1,417,446 + 8959 mRNA_591 0.51 -1.1
1,417,985 - 8959 mRNA_591 0.78 -2.3
1,418,011 + 8959 mRNA_591 0.79 -1.4
1,418,022 - 8959 mRNA_591 0.80 -1.1
1,418,151 - 8959 mRNA_591 0.87 1.4
1,418,156 + 8959 mRNA_591 0.87 0.5
1,418,159 + 8959 mRNA_591 0.87 -0.4
1,418,172 + 8959 mRNA_591 0.88 -1.8
1,418,195 + 8959 mRNA_591 0.89 1.0
1,418,361 + -1.2
1,418,364 - -0.4
1,418,460 - -0.0
1,418,465 - 0.0
1,418,472 - 0.1
1,418,712 - 0.4
1,419,064 + 8960 mRNA_592 0.15 -0.4
1,419,075 + 8960 mRNA_592 0.15 1.1
1,419,340 + 8960 mRNA_592 0.22 0.8