Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_556

Experiments: YNB Ricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_555: 8923 - K03115 CSNK2B casein kinase II subunit beta, at 1321464 to 1322533 8923 mRNA_556: 8924 - HMMPfam-Acetyltransferase (GNAT) domain-PF13302,SUPERFAMILY--SSF55729, at 1322822 to 1323921 8924 mRNA_557: 8925 - HMMPfam-Ras association (RalGDS/AF-6) domain-PF00788,ProSiteProfiles-Ras-associating (RA) domain profile.-PS50200,SMART-Ras association (RalGDS/AF-6) domain-SM00314,SUPERFAMILY--SSF54236, at 1324650 to 1329010 8925

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
remove
1,322,897 + -0.3
1,323,003 + 8924 mRNA_556 0.16 0.2
1,323,459 - 8924 mRNA_556 0.58 1.3
1,323,488 + 8924 mRNA_556 0.61 -2.2
1,323,618 - 8924 mRNA_556 0.72 0.2
1,323,633 + 8924 mRNA_556 0.74 0.8
1,323,643 - 8924 mRNA_556 0.75 0.1
1,323,747 + 8924 mRNA_556 0.84 1.4
1,323,754 + 8924 mRNA_556 0.85 -0.1
1,323,894 + -0.8
1,324,074 + -0.1
1,324,359 + 0.3
1,324,364 + -0.2
1,324,375 + 0.5
1,324,386 - -0.3
1,324,394 + -1.5
1,324,479 - -0.6
1,324,556 + -0.9
1,324,670 + 0.1