Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_549

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_548: 8916 - K15084 SLC25A16, GDA, LEU5 solute carrier family 25 (mitochondrial carrier protein), member 16, at 1304411 to 1305873 8916 mRNA_549: 8917 - K12618 XRN1, SEP1, KEM1 5'-3' exoribonuclease 1, at 1306606 to 1311810 8917 mRNA_550: 8918 - KOG4391 Predicted alpha/beta hydrolase BEM46, at 1312000 to 1313154 8918

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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1,305,915 - -0.3
1,305,918 - 1.1
1,305,925 + -0.2
1,305,929 - -0.2
1,305,942 + 0.9
1,305,948 + 0.2
1,305,954 + 0.9
1,306,065 + 0.9
1,306,081 + 0.0
1,306,099 + 0.9
1,307,552 + 8917 mRNA_549 0.18 0.4
1,311,216 - 8917 mRNA_549 0.89 -1.6
1,311,746 + -3.3
1,311,777 + -0.4
1,311,928 - -1.8
1,311,974 + 0.3
1,312,120 + 8918 mRNA_550 0.10 -0.3
1,312,380 + 8918 mRNA_550 0.33 0.6
1,312,539 + 8918 mRNA_550 0.47 -0.2