Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_456

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_456: 8824 - Hypothetical Protein, at 1062231 to 1064186 8824 mRNA_457: 8825 - K14963 WDR5, SWD3, CPS30 COMPASS component SWD3, at 1064648 to 1065964 8825

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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1,061,243 - -1.0
1,061,244 + 0.4
1,061,327 - 0.7
1,061,348 - -0.5
1,061,384 + -4.1
1,061,494 + 0.2
1,061,499 - -0.3
1,061,511 + -1.2
1,061,515 + -0.5
1,061,523 - 0.4
1,061,548 + 1.1
1,061,570 - 1.0
1,061,571 + -0.1
1,061,579 - -0.6
1,061,579 - -0.9
1,061,611 - 0.6
1,061,616 - -0.0
1,061,617 - 1.4
1,061,624 - 0.1
1,061,631 + 0.3
1,061,633 - -0.5
1,061,657 + 0.5
1,061,659 - -0.0
1,061,660 - -1.6
1,061,670 + -0.1
1,061,671 + 0.4
1,061,676 + -0.1
1,061,698 - 2.1
1,061,722 + -0.6
1,061,759 - -1.6
1,061,767 + 0.4
1,061,777 - 0.7
1,061,782 - 0.8
1,061,801 + 0.5
1,061,806 - -0.2
1,061,809 - 2.2
1,061,809 - 1.5
1,061,810 - 1.6
1,061,812 + -1.0
1,061,813 + 1.0
1,061,814 + -0.2
1,061,814 + -1.8
1,061,828 - 0.3
1,061,837 + 0.1
1,061,838 - 0.1
1,061,847 + 1.6
1,061,848 + 0.2
1,061,850 + 0.8
1,061,850 - -0.6
1,061,854 - -0.1
1,061,866 - 0.3
1,061,867 - -1.8
1,061,871 + 0.2
1,061,877 + -0.1
1,061,982 - 0.1
1,061,983 + 1.6
1,062,004 + -0.3
1,062,060 + 1.9
1,062,152 - 0.2
1,062,155 - -0.7
1,062,167 - -0.1
1,062,180 - 1.4
1,062,204 + -0.8
1,062,264 + -3.3
1,062,321 - 0.1
1,062,917 + 8824 mRNA_456 0.35 1.0
1,063,166 + 8824 mRNA_456 0.48 -0.1
1,063,540 + 8824 mRNA_456 0.67 0.2
1,064,110 + -0.5
1,064,414 - 1.4