Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_417

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_416: 8784 - Hypothetical Protein, at 972046 to 973465 8784 mRNA_417: 8785 - KOG4697 Integral membrane protein involved in transport between the late Golgi and endosome, at 973590 to 974560 8785

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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972,818 + 8784 mRNA_416 0.54 -0.6
972,854 + 8784 mRNA_416 0.57 0.3
973,013 + 8784 mRNA_416 0.68 0.4
973,096 - 8784 mRNA_416 0.74 0.7
973,264 + 8784 mRNA_416 0.86 0.3
973,447 - 0.0
973,484 - 0.3
973,582 - 1.1
973,583 - -2.6
973,704 - 8785 mRNA_417 0.12 -0.2
973,721 + 8785 mRNA_417 0.13 0.0
973,722 - 8785 mRNA_417 0.14 2.2
974,570 + 0.4
974,589 - 3.2
974,597 + 2.2
974,730 + -0.4
974,730 + 0.9
974,763 + 0.3
974,851 - -2.8
974,902 - 0.1
974,991 + 0.1
974,991 - -1.4
975,008 - -1.3
975,020 - -1.8
975,022 - 0.9
975,025 + 1.5
975,025 - 1.2
975,025 - -0.8
975,025 + -2.3
975,132 + 0.8
975,325 + 1.0
975,337 - -1.3
975,466 + -0.3