Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_394

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_393: 8761 - Hypothetical Protein, at 915771 to 916536 8761 mRNA_394: 8762 - KOG0714 Molecular chaperone (DnaJ superfamily), at 916716 to 918157 8762 mRNA_395: 8763 - KOG2262 Sexual differentiation process protein ISP4, at 918678 to 921418 8763

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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915,752 - -0.4
915,775 + -0.4
916,040 - 8761 mRNA_393 0.35 0.0
916,347 + 8761 mRNA_393 0.75 -1.3
916,516 + -1.6
917,077 - 8762 mRNA_394 0.25 0.2
917,406 - 8762 mRNA_394 0.48 -0.8
917,418 - 8762 mRNA_394 0.49 -1.4
917,545 - 8762 mRNA_394 0.57 0.4
917,588 - 8762 mRNA_394 0.60 0.4
917,670 + 8762 mRNA_394 0.66 -0.9
917,674 - 8762 mRNA_394 0.66 0.9
918,268 - -0.1
918,387 - 1.2
918,397 + 0.3
918,410 - 0.7
918,412 - 1.3
918,437 + 0.4
918,548 + -0.1
918,563 - -1.1
918,692 - -0.3
918,693 - 1.4
918,693 + -0.3
918,713 + -0.2
918,817 + 1.5
918,843 + -1.8
918,994 - 8763 mRNA_395 0.12 2.4
918,997 - 8763 mRNA_395 0.12 0.1
919,147 - 8763 mRNA_395 0.17 -0.9