Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_385

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_383: 8751 - K02922 RP-L37e, RPL37 large subunit ribosomal protein L37e, at 890896 to 891869 8751 mRNA_384: 8752 - KOG0004 Ubiquitin/40S ribosomal protein S27a fusion, at 892471 to 892767 8752 mRNA_385: 8753 - Hypothetical Protein, at 892828 to 898381 8753 mRNA_386: 8754 - Hypothetical Protein, at 898444 to 900294 8754

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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892,974 + -0.3
892,987 + 0.1
892,994 - 1.7
893,000 - 0.1
893,403 - 8753 mRNA_385 0.10 0.4
893,711 + 8753 mRNA_385 0.16 -0.1
893,730 + 8753 mRNA_385 0.16 1.7
894,133 - 8753 mRNA_385 0.23 1.2
894,149 + 8753 mRNA_385 0.24 -1.5
894,613 + 8753 mRNA_385 0.32 0.2
895,451 - 8753 mRNA_385 0.47 1.1
895,598 + 8753 mRNA_385 0.50 0.6
895,715 - 8753 mRNA_385 0.52 1.5
896,020 - 8753 mRNA_385 0.57 -3.4
896,496 - 8753 mRNA_385 0.66 0.5
896,766 - 8753 mRNA_385 0.71 0.4
897,198 - 8753 mRNA_385 0.79 -0.3
897,348 - 8753 mRNA_385 0.81 0.1
897,640 - 8753 mRNA_385 0.87 0.6
897,652 - 8753 mRNA_385 0.87 -0.2
897,659 - 8753 mRNA_385 0.87 1.1
897,664 + 8753 mRNA_385 0.87 0.7
897,790 - 8753 mRNA_385 0.89 0.0
897,791 + 8753 mRNA_385 0.89 -0.3
897,792 - 8753 mRNA_385 0.89 0.8
897,806 - 8753 mRNA_385 0.90 -0.3
897,819 + 8753 mRNA_385 0.90 -0.6
897,830 - 0.2
897,838 + 0.6
897,926 + 0.2
897,933 + 1.8
897,939 - 0.7
898,538 - 0.3
898,540 - -1.3
898,801 - 8754 mRNA_386 0.19 1.7
898,832 + 8754 mRNA_386 0.21 1.9
899,121 - 8754 mRNA_386 0.37 1.4