Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_379

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_378: 8746 - K05012 CLCN3_4_5 chloride channel 3/4/5, at 879759 to 883039 8746 mRNA_379: 8747 - HMMPfam-Inositolphosphorylceramide synthase subunit Kei1-PF08552, at 883203 to 884818 8747 mRNA_380: 8748 - K15322 TSEN2 tRNA-splicing endonuclease subunit Sen2, at 884980 to 886576 8748

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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883,095 - -1.3
883,211 - 0.1
883,220 + -0.6
883,221 - -4.7
883,226 + 0.3
883,243 - 1.3
883,251 + 2.1
883,403 - 8747 mRNA_379 0.12 0.6
883,410 - 8747 mRNA_379 0.13 0.1
884,274 - 8747 mRNA_379 0.66 0.2
884,590 - 8747 mRNA_379 0.86 0.2
884,852 - 0.5
884,894 + -0.6
884,915 + 0.1