Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_367

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_366: 8734 - HMMPfam-Thioredoxin-like-PF13905,SUPERFAMILY--SSF52833, at 849261 to 850411 8734 mRNA_367: 8735 - ProSiteProfiles-TPR repeat region circular profile.-PS50293,SMART-Tetratricopeptide repeats-SM00028,SUPERFAMILY--SSF48452, at 850981 to 853734 8735 mRNA_368: 8736 - KOG2100 Dipeptidyl aminopeptidase, at 853834 to 856786 8736

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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850,015 - 8734 mRNA_366 0.66 -0.3
850,162 - 8734 mRNA_366 0.78 -1.6
850,460 - -0.5
850,470 + 1.1
850,483 + -1.7
850,486 + 1.2
850,599 - -0.4
850,605 - -0.5
850,619 - 0.7
850,621 + 1.0
850,751 + 1.2
850,776 - 0.1
850,783 - -0.2
850,791 + 0.2
850,795 - -1.5
850,810 - -2.6
850,814 + 1.9
850,817 - -0.3
850,828 + 0.3
850,932 + -1.5
851,013 + 0.1
851,084 + -0.8
851,144 - -1.6
851,255 - 0.2
851,651 - 8735 mRNA_367 0.24 0.5
851,671 - 8735 mRNA_367 0.25 0.1
851,683 + 8735 mRNA_367 0.25 0.1
851,732 - 8735 mRNA_367 0.27 -0.3
851,920 - 8735 mRNA_367 0.34 -1.0
851,950 - 8735 mRNA_367 0.35 -0.1
852,092 + 8735 mRNA_367 0.40 -2.0
852,544 - 8735 mRNA_367 0.57 1.1
853,299 + 8735 mRNA_367 0.84 -1.8
853,611 - 0.7
854,038 + -1.2
854,069 + 0.8
854,183 - 8736 mRNA_368 0.12 0.1
854,317 + 8736 mRNA_368 0.16 -1.1