Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_362

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_362: 8730 - HMMPfam-CENP-S associating Centromere protein X-PF09415,SUPERFAMILY--SSF47113, at 842601 to 843076 8730 mRNA_363: 8731 - K14776 DDX10, DBP4 ATP-dependent RNA helicase DDX10/DBP4, at 843227 to 846125 8731

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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841,662 + -0.4
841,664 + -2.2
841,678 + 0.0
841,684 + 0.5
841,686 - -1.1
841,704 + -1.2
841,717 - 0.5
841,753 - 1.2
841,754 + -0.9
841,766 - -0.3
841,797 + 1.2
841,797 + 0.8
841,812 + 0.1
841,818 + 0.9
841,818 + -0.1
841,822 - 0.5
842,154 + -0.0
842,301 - -0.7
842,710 - 8730 mRNA_362 0.23 0.6
842,852 - 8730 mRNA_362 0.53 -1.6
842,863 + 8730 mRNA_362 0.55 -1.1
842,868 + 8730 mRNA_362 0.56 -0.3
842,998 - 8730 mRNA_362 0.83 -0.5
843,005 + 8730 mRNA_362 0.85 -0.1
843,015 - 8730 mRNA_362 0.87 1.5
843,142 - 0.2
843,154 - 0.1
843,160 + 0.5
843,172 + 0.0
843,176 - -1.5
843,183 - 1.0