Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_355

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_354: 8722 - K17583 NOM1 nucleolar MIF4G domain-containing protein 1, at 827130 to 830488 8722 mRNA_355: 8723 - Hypothetical Protein, at 830801 to 831631 8723 mRNA_356: 8724 - K02727 PSMA3 20S proteasome subunit alpha 7, at 832333 to 833691 8724

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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830,525 + -0.1
830,544 + -1.2
830,555 - 0.4
830,682 + 0.7
830,693 + -1.2
830,717 + -1.0
830,729 - 0.9
831,108 - 8723 mRNA_355 0.37 -0.1
831,277 + 8723 mRNA_355 0.57 1.2
831,285 - 8723 mRNA_355 0.58 0.7
831,601 + -1.7
831,607 - -1.2
831,740 - 2.0
831,752 - 0.3
831,754 - 1.3
831,770 - -0.3
831,771 + 0.3
831,789 + -0.7
831,922 - 1.9
831,927 - 0.7
831,929 - 0.5
831,932 + 1.0
831,936 + -0.1
831,938 - 0.1
831,939 - -0.8
831,961 + -1.1
832,001 - 1.0
832,012 - -1.2
832,080 - -0.4
832,199 - -4.0
832,356 + -2.5