Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_330

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_329: 8697 - Hypothetical Protein, at 781118 to 782181 8697 mRNA_330: 8698 - KOG2018 Predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis, at 782807 to 784581 8698

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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781,859 + 8697 mRNA_329 0.70 1.3
781,862 - 8697 mRNA_329 0.70 0.6
781,882 - 8697 mRNA_329 0.72 -0.1
781,889 - 8697 mRNA_329 0.72 1.0
781,895 + 8697 mRNA_329 0.73 -0.0
782,005 - 8697 mRNA_329 0.83 0.4
782,169 - -0.8
782,312 + 0.4
782,578 - -0.2
782,644 + -0.2
782,780 + 1.4
782,925 - -0.1
783,204 - 8698 mRNA_330 0.22 0.2
783,220 - 8698 mRNA_330 0.23 -0.5
783,766 - 8698 mRNA_330 0.54 0.8
783,917 - 8698 mRNA_330 0.63 -0.0
784,092 + 8698 mRNA_330 0.72 0.8
784,419 - 1.4
784,445 - 1.0
784,631 - 1.0
784,781 + 0.8
784,793 - 0.8
784,796 + 2.0
784,930 - -0.8
784,931 - 0.8
784,931 - 1.0
784,932 + 0.5
784,936 + 0.4
784,939 - 0.1
784,950 + -0.6
784,951 + 0.1
784,961 + 1.7
784,966 + 0.8
784,967 + -0.4
784,969 - -1.7
784,970 - 0.2
784,973 + -0.7
784,979 + -1.7
785,091 - 0.2
785,101 - -0.1
785,247 - 0.7
785,255 - -0.3
785,366 - -0.5
785,381 + 0.3
785,384 - 2.0
785,412 + -0.5
785,414 + -3.1
785,550 + 1.0
785,553 + 2.4
785,556 - 0.8
785,579 - -2.4