Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_326

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_325: 8693 - KOG0054 Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily, at 770334 to 776057 8693 mRNA_326: 8694 - K17983 SHE9 sensitive to high expression protein 9, mitochondrial, at 776267 to 777781 8694 mRNA_327: 8695 - KOG0378 40S ribosomal protein S4, at 778008 to 779249 8695

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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775,269 + 8693 mRNA_325 0.86 0.8
775,425 + 8693 mRNA_325 0.89 -0.1
775,688 - 0.8
776,012 + -0.3
776,136 - -1.9
776,136 - 0.5
776,139 + -1.8
776,146 - -0.6
776,154 - -1.4
776,164 + -0.1
776,170 - -1.1
776,241 - 2.1
776,478 + 8694 mRNA_326 0.14 -1.0
777,052 + 8694 mRNA_326 0.52 -0.4
777,187 - 8694 mRNA_326 0.61 0.0
777,189 + 8694 mRNA_326 0.61 -2.0
777,335 + 8694 mRNA_326 0.70 -0.9
777,617 + 8694 mRNA_326 0.89 -2.0
777,627 + 8694 mRNA_326 0.90 -1.5
777,790 + 0.5
777,798 + 0.4
777,814 + -1.0
777,819 + 0.5
777,840 + -1.1
778,699 - 8695 mRNA_327 0.56 0.6