Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_320

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_319: 8687 - KOG2134 Polynucleotide kinase 3' phosphatase, at 759335 to 760537 8687 mRNA_320: 8688 - Hypothetical Protein, at 760656 to 762781 8688 mRNA_321: 8689 - KOG4317 Predicted Zn-finger protein, at 762839 to 764616 8689

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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759,880 - 8687 mRNA_319 0.45 0.5
760,182 - 8687 mRNA_319 0.70 -0.8
760,325 - 8687 mRNA_319 0.82 -1.1
760,329 - 8687 mRNA_319 0.83 0.2
760,350 + 8687 mRNA_319 0.84 1.2
760,450 + 0.2
760,611 - -0.7
760,639 - -0.1
760,752 - 0.4
760,753 - 0.3
760,753 + 0.5
760,753 - 1.4
760,755 + 0.6
760,756 + 1.0
761,027 - 8688 mRNA_320 0.17 1.3
761,046 + 8688 mRNA_320 0.18 -0.2
761,680 - 8688 mRNA_320 0.48 -1.8
761,802 - 8688 mRNA_320 0.54 -0.5
761,914 + 8688 mRNA_320 0.59 2.1
762,182 - 8688 mRNA_320 0.72 1.4
762,477 - 8688 mRNA_320 0.86 -0.7
762,501 + 8688 mRNA_320 0.87 0.3
762,645 + 1.5
762,785 - -2.0
762,794 + 1.1