Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_319

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_318: 8686 - Interpro Fungal domain of unknown function (DUF1750), at 757594 to 759249 8686 mRNA_319: 8687 - KOG2134 Polynucleotide kinase 3' phosphatase, at 759335 to 760537 8687 mRNA_320: 8688 - Hypothetical Protein, at 760656 to 762781 8688

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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758,983 - 8686 mRNA_318 0.84 -1.5
759,007 - 8686 mRNA_318 0.85 0.2
759,128 + 0.3
759,281 - -1.9
759,283 - -0.6
759,294 + -0.0
759,424 + -0.4
759,424 - -0.9
759,446 + 0.9
759,591 - 8687 mRNA_319 0.21 -0.6
759,593 - 8687 mRNA_319 0.21 -0.2
759,596 + 8687 mRNA_319 0.22 -0.6
759,880 - 8687 mRNA_319 0.45 0.5
760,182 - 8687 mRNA_319 0.70 -0.8
760,325 - 8687 mRNA_319 0.82 -1.1
760,329 - 8687 mRNA_319 0.83 0.2
760,350 + 8687 mRNA_319 0.84 1.2
760,450 + 0.2
760,611 - -0.7
760,639 - -0.1
760,752 - 0.4
760,753 - 0.3
760,753 + 0.5
760,753 - 1.4
760,755 + 0.6
760,756 + 1.0
761,027 - 8688 mRNA_320 0.17 1.3
761,046 + 8688 mRNA_320 0.18 -0.2