Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_305

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_305: 8673 - HMMPfam-Peroxisomal biogenesis factor 11 (PEX11)-PF05648, at 726265 to 727388 8673 mRNA_306: 8674 - HMMPfam-Relaxase/Mobilisation nuclease domain-PF03432,ProSiteProfiles-Tudor domain profile.-PS50304,SMART-Tudor domain-SM00333,SUPERFAMILY--SSF63748, at 727879 to 728992 8674

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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725,508 + -1.4
725,568 - -0.4
725,695 - 1.7
725,729 - 0.1
725,732 + 0.7
725,871 - -0.7
725,872 - -0.0
725,872 + 0.0
725,873 - 0.1
725,884 - 1.3
725,888 - 0.8
725,890 + 1.3
725,963 - -1.0
726,003 + -0.2
726,004 + -0.5
726,006 + 0.3
726,010 + -0.4
726,022 - -0.6
726,026 + 1.0
726,026 + -1.6
726,184 - 1.2
726,293 + -2.4
726,435 + 8673 mRNA_305 0.15 -4.0
726,857 + 8673 mRNA_305 0.53 -4.1
727,311 - -3.1
727,454 + -0.6