Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_273

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_272: 8640 - KOG4178 Soluble epoxide hydrolase, at 654316 to 655397 8640 mRNA_273: 8641 - K15174 PAF1 RNA polymerase II-associated factor 1, at 655778 to 657591 8641 mRNA_274: 8642 - BLAST Putative Pc16g06240 protein [Torrubiella hemipterigena], at 657663 to 658330 8642

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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654,863 - 8640 mRNA_272 0.51 -1.1
655,441 - 0.9
655,580 + 0.5
655,583 + -1.1
655,586 - 2.4
655,597 - 0.7
655,603 + 0.2
655,603 + 0.1
655,603 + 0.8
655,605 + 0.0
655,607 + 0.6
655,609 - -0.1
655,610 + -1.3
655,612 + -0.5
655,623 + 1.1
655,725 - -0.6
655,762 + 0.5
655,768 + 0.6
655,768 + 0.6
656,313 + 8641 mRNA_273 0.29 -2.4
656,471 - 8641 mRNA_273 0.38 -1.7
656,615 - 8641 mRNA_273 0.46 1.4
656,874 - 8641 mRNA_273 0.60 -1.2
657,472 - 1.2
657,622 - -1.8
657,648 + -1.4
657,673 + -0.3
657,843 + 8642 mRNA_274 0.27 0.4
658,248 + 8642 mRNA_274 0.88 1.2
658,399 - 0.7
658,430 + -0.1
658,524 - -0.0