Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_261

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_260: 8628 - KOG2534 DNA polymerase IV (family X), at 625910 to 627593 8628 mRNA_261: 8629 - KOG1745 Histones H3 and H4, at 627613 to 628433 8629 mRNA_262: 8630 - HMMPfam-Flavin reductase like domain-PF01613, at 628698 to 628997 8630

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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626,704 + 8628 mRNA_260 0.47 0.4
626,748 - 8628 mRNA_260 0.50 0.6
626,888 - 8628 mRNA_260 0.58 -0.2
627,058 + 8628 mRNA_260 0.68 -0.2
627,061 + 8628 mRNA_260 0.68 -1.1
627,208 + 8628 mRNA_260 0.77 -0.4
627,215 - 8628 mRNA_260 0.77 0.9
627,500 + 1.8
627,547 + 2.1
627,596 - -1.0
627,680 - -0.7
627,924 + 8629 mRNA_261 0.38 -1.7
628,067 + 8629 mRNA_261 0.55 0.5
628,194 - 8629 mRNA_261 0.71 0.6
628,201 + 8629 mRNA_261 0.72 -0.2
628,357 - 0.3
629,082 - -0.0
629,376 - -1.8
629,376 + -1.3
629,391 + -2.0
629,392 + -3.2