Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_209

Experiments: YNB Ricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_208: 8576 - K19270 yfbT, yniC sugar-phosphatase, at 509139 to 510075 8576 mRNA_209: 8577 - K12571 PAN2 PAB-dependent poly(A)-specific ribonuclease subunit 2, at 510155 to 514679 8577 mRNA_210: 8578 - K08675 PRSS15, PIM1 Lon-like ATP-dependent protease, at 515116 to 519191 8578

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
remove
509,405 - 8576 mRNA_208 0.28 0.4
509,546 - 8576 mRNA_208 0.43 -0.2
510,127 + 1.1
510,420 + 0.4
510,716 - 8577 mRNA_209 0.12 1.1
510,737 - 8577 mRNA_209 0.13 -1.7
511,182 - 8577 mRNA_209 0.23 1.0
511,262 + 8577 mRNA_209 0.24 0.5
511,301 + 8577 mRNA_209 0.25 -0.6
511,757 + 8577 mRNA_209 0.35 1.1
512,329 - 8577 mRNA_209 0.48 3.1
512,529 + 8577 mRNA_209 0.52 1.0
512,600 - 8577 mRNA_209 0.54 1.1
512,864 + 8577 mRNA_209 0.60 -0.3
512,869 + 8577 mRNA_209 0.60 2.7
512,951 - 8577 mRNA_209 0.62 0.7
513,402 + 8577 mRNA_209 0.72 0.5
513,583 - 8577 mRNA_209 0.76 -0.7
513,683 - 8577 mRNA_209 0.78 0.5
514,007 + 8577 mRNA_209 0.85 0.9
514,414 - 1.1
514,418 - -0.3
514,444 + 1.2
514,571 + 2.5
514,576 - 1.1
514,576 - 1.9
514,577 + 2.6
514,577 - -1.3
514,697 + 1.6
514,852 - 1.7
514,872 - -1.6
514,878 - -0.2
514,907 - 2.1
514,987 - 0.3
515,024 - 0.3
515,030 - 1.1
515,040 - 0.7
515,041 + -1.0
515,054 - -0.0
515,063 + -0.8
515,087 + 1.6