Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_153

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_153: 8521 - KOG4826 C-8,7 sterol isomerase, at 383470 to 384442 8521 mRNA_154: 8522 - Hypothetical Protein, at 384974 to 388118 8522

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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382,485 + 0.5
382,524 + 0.6
382,624 - 0.0
382,927 - -0.1
382,993 + 0.5
383,068 + 0.4
383,076 + 0.9
383,201 + 1.3
383,209 - 0.7
383,218 + -0.3
383,238 + -0.7
383,326 + -0.0
383,353 + -0.5
383,374 + 0.6
383,386 + 0.5
383,502 + -0.1
383,505 - -0.1
383,610 - 8521 mRNA_153 0.14 1.0
383,637 - 8521 mRNA_153 0.17 0.1
384,076 - 8521 mRNA_153 0.62 1.5
384,106 + 8521 mRNA_153 0.65 0.1
384,230 + 8521 mRNA_153 0.78 -0.5
384,344 - 8521 mRNA_153 0.90 0.7
384,476 - 0.7
384,645 - 0.2
384,651 - 3.0
384,654 - -0.2
384,655 - -0.5
384,655 - -1.0
384,672 + -0.3
384,672 - 0.9
384,720 + 1.6
385,298 + 8522 mRNA_154 0.10 1.3
385,308 - 8522 mRNA_154 0.11 0.6
385,332 - 8522 mRNA_154 0.11 -1.4