Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_126

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_125: 8493 - HMMPfam-Alpha/beta hydrolase family-PF12695,SUPERFAMILY--SSF53474, at 299830 to 300571 8493 mRNA_126: 8494 - Hypothetical Protein, at 300775 to 301342 8494

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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300,229 + 8493 mRNA_125 0.54 -0.6
300,694 + 0.4
300,820 + -0.4
300,824 - 0.4
301,109 - 8494 mRNA_126 0.59 -2.1
301,131 + 8494 mRNA_126 0.63 0.8
301,131 + 8494 mRNA_126 0.63 0.4
301,232 - 8494 mRNA_126 0.80 -0.4
301,245 - 8494 mRNA_126 0.83 0.1
301,246 + 8494 mRNA_126 0.83 0.1
301,265 + 8494 mRNA_126 0.86 0.3
301,279 + 8494 mRNA_126 0.89 1.0
301,304 + -0.0
301,313 + 0.7
301,350 + -2.3
301,542 + 0.5
301,550 + -0.8
301,554 + 0.2
301,564 + -0.5
301,665 + -0.1
301,670 + 0.8
301,676 - 2.2
301,694 + 2.1
301,695 - 0.3
301,702 - 0.9
301,720 - 0.1
301,728 + 0.8
301,733 - 0.4
301,737 + 0.2
301,740 + 0.2
301,741 - 1.0
301,754 + 0.6
301,756 - 0.4
301,760 + 0.0
301,824 - 0.8
301,851 + -1.1
301,877 + 1.5
301,926 + -0.5
302,214 + -0.9