Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_110

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_109: 8477 - Hypothetical Protein, at 259065 to 259869 8477 mRNA_110: 8478 - KOG3399 Predicted Yippee-type zinc-binding protein, at 260137 to 260817 8478 mRNA_111: 8479 - KOG0254 Predicted transporter (major facilitator superfamily), at 260930 to 263760 8479

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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259,287 - 8477 mRNA_109 0.28 2.2
259,765 + 8477 mRNA_109 0.87 0.9
259,910 - 2.3
259,917 - 3.3
259,955 + -0.1
259,992 - 0.4
260,130 + -1.4
260,258 + 8478 mRNA_110 0.18 1.8
260,272 - 8478 mRNA_110 0.20 1.5
260,309 + 8478 mRNA_110 0.25 0.7
260,420 + 8478 mRNA_110 0.42 0.5
260,424 + 8478 mRNA_110 0.42 1.1
260,436 - 8478 mRNA_110 0.44 -1.1
260,752 + 1.9
260,890 - 0.6
260,921 + 1.0
260,990 + -1.0
261,103 - 0.2
261,144 + 0.0
261,150 - 1.5
261,760 + 8479 mRNA_111 0.29 0.7