Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_84

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_83: 8451 - Hypothetical Protein, at 197528 to 201315 8451 mRNA_84: 8452 - K01522 FHIT bis(5'-adenosyl)-triphosphatase, at 201823 to 202716 8452 mRNA_85: 8453 - BLAST glutamine synthetase [Sanghuangporus baumii], at 203010 to 204516 8453

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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200,894 - 8451 mRNA_83 0.89 0.4
201,076 - -0.2
201,380 - -0.8
201,449 - -1.8
201,487 + 0.3
201,510 - -0.5
201,795 - 0.9
201,796 - 2.5
202,233 + 8452 mRNA_84 0.46 0.6
202,687 - -3.2
202,699 - -1.2
202,703 - -1.3
202,705 + -0.4
202,930 + -0.0
203,111 + -1.0
203,119 - -0.3
203,124 - -0.5
203,126 + 0.4
203,403 + 8453 mRNA_85 0.26 -0.4
203,409 + 8453 mRNA_85 0.26 -1.0
203,454 - 8453 mRNA_85 0.29 1.2
203,695 - 8453 mRNA_85 0.45 1.4