Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_73

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_73: 8441 - K00698 CHS1 chitin synthase, at 169827 to 173814 8441 mRNA_74: 8442 - KOG3600 Thyroid hormone receptor-associated protein complex, subunit TRAP240, at 174089 to 180350 8442

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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168,846 + 0.1
168,861 - 1.4
168,864 - -0.8
168,906 + 0.9
168,935 - -1.6
169,155 - 0.4
169,182 - -1.4
169,202 + 0.8
169,356 + 0.0
169,358 - -1.2
169,648 - -0.7
169,668 - -0.2
169,790 - -2.8
169,840 + -1.4
170,219 + 0.1
170,253 - 8441 mRNA_73 0.11 -1.7
170,901 - 8441 mRNA_73 0.27 0.6
171,079 + 8441 mRNA_73 0.31 -1.0
171,383 - 8441 mRNA_73 0.39 -0.8
171,551 - 8441 mRNA_73 0.43 -0.2
172,023 - 8441 mRNA_73 0.55 0.1
172,280 - 8441 mRNA_73 0.62 1.2
172,438 - 8441 mRNA_73 0.65 0.9
172,739 + 8441 mRNA_73 0.73 1.5
172,751 - 8441 mRNA_73 0.73 0.9
172,813 - 8441 mRNA_73 0.75 -0.2
172,962 + 8441 mRNA_73 0.79 1.0
173,174 - 8441 mRNA_73 0.84 -0.2
173,424 - 1.3
173,424 + -0.0
173,518 - -2.6
173,553 - 0.9
173,837 + 0.0
173,862 + -0.9
174,086 - 0.3
174,096 - 0.5
174,298 + -2.0
174,298 + -1.6
174,532 + -0.3
174,678 + -2.6