Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_58

Experiments: YNB Ricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_57: 8425 - K15176 CTR9 RNA polymerase-associated protein CTR9, at 133642 to 138012 8425 mRNA_58: 8426 - HMMPfam-Arrestin (or S-antigen), N-terminal domain-PF00339,SUPERFAMILY--SSF81296, at 138676 to 140962 8426 mRNA_59: 8427 - Hypothetical Protein, at 141223 to 142116 8427

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
remove
137,847 + 2.5
138,126 - 0.2
138,131 - 0.9
138,147 - 0.3
138,156 + -0.7
138,164 + -0.3
138,186 + 2.5
138,187 - 0.2
138,238 - -0.0
138,293 - 0.3
138,302 - -1.9
138,314 - 1.6
138,322 + 1.0
138,328 + 0.7
138,335 - 0.3
138,461 - 0.9
138,645 + 0.9
138,649 - -0.1
138,661 - -0.3
138,947 + 8426 mRNA_58 0.12 1.3
139,216 - 8426 mRNA_58 0.24 0.5
139,335 + 8426 mRNA_58 0.29 0.3
139,369 - 8426 mRNA_58 0.30 -0.4
139,376 + 8426 mRNA_58 0.31 1.2
139,396 + 8426 mRNA_58 0.31 2.4
139,428 - 8426 mRNA_58 0.33 0.1
139,522 + 8426 mRNA_58 0.37 -0.0
139,649 - 8426 mRNA_58 0.43 -0.2
139,981 - 8426 mRNA_58 0.57 -1.1
140,148 + 8426 mRNA_58 0.64 1.2
140,276 - 8426 mRNA_58 0.70 2.5
140,436 - 8426 mRNA_58 0.77 -1.7
140,440 + 8426 mRNA_58 0.77 -1.4
140,545 - 8426 mRNA_58 0.82 -0.3
140,593 - 8426 mRNA_58 0.84 -0.0
140,696 - 8426 mRNA_58 0.88 0.3
140,902 + -0.5
141,132 - -0.3
141,177 - 2.2
141,196 + -1.4
141,449 - 8427 mRNA_59 0.25 -1.3
141,460 - 8427 mRNA_59 0.27 0.6
141,509 - 8427 mRNA_59 0.32 -0.6
141,518 - 8427 mRNA_59 0.33 1.2
141,747 + 8427 mRNA_59 0.59 1.2
141,774 + 8427 mRNA_59 0.62 -0.9
141,788 - 8427 mRNA_59 0.63 1.2
141,818 - 8427 mRNA_59 0.67 -1.3
141,824 - 8427 mRNA_59 0.67 1.4
141,907 - 8427 mRNA_59 0.77 0.7