Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8455

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8454: 16822 - Hypothetical Protein, at 1273355 to 1274280 16822 mRNA_8455: 16823 - K06013 STE24 STE24 endopeptidase, at 1274960 to 1276666 16823 mRNA_8456: 16824 - Hypothetical Protein, at 1276790 to 1279771 16824

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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1,274,028 - 16822 mRNA_8454 0.73 -0.3
1,274,185 - 16822 mRNA_8454 0.90 0.3
1,274,444 + -0.4
1,274,451 - 0.2
1,274,468 + -0.6
1,274,646 - -0.3
1,274,865 - 1.1
1,274,878 - 1.7
1,274,881 - 0.2
1,274,964 + -2.9
1,275,056 + 0.5
1,275,180 - 16823 mRNA_8455 0.13 -0.4
1,275,212 - 16823 mRNA_8455 0.15 0.3
1,275,219 + 16823 mRNA_8455 0.15 -0.4
1,275,246 + 16823 mRNA_8455 0.17 -0.5
1,275,325 + 16823 mRNA_8455 0.21 0.2
1,275,374 + 16823 mRNA_8455 0.24 0.4
1,275,431 - 16823 mRNA_8455 0.28 -0.0
1,275,592 - 16823 mRNA_8455 0.37 -0.1
1,275,929 - 16823 mRNA_8455 0.57 0.6
1,275,934 - 16823 mRNA_8455 0.57 0.6
1,276,043 + 16823 mRNA_8455 0.63 1.4
1,276,067 - 16823 mRNA_8455 0.65 0.2
1,276,080 + 16823 mRNA_8455 0.66 -1.1
1,276,363 + 16823 mRNA_8455 0.82 -0.3
1,276,504 - -1.0
1,276,537 + 2.1
1,276,557 + 1.3
1,276,634 - 0.0
1,276,734 + 0.2
1,276,754 - -0.0
1,276,819 - -0.9
1,276,884 + 2.0
1,277,057 + 0.6
1,277,556 - 16824 mRNA_8456 0.26 -0.7