Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8366

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8364: 16732 - K01488 add, ADA adenosine deaminase, at 1043494 to 1044920 16732 mRNA_8365: 16733 - Hypothetical Protein, at 1045282 to 1045452 16733 mRNA_8366: 16734 - BLAST similar to An01g09190 [Aspergillus kawachii IFO 4308], at 1045638 to 1046770 16734 mRNA_8367: 16735 - Hypothetical Protein, at 1046951 to 1048222 16735

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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1,044,761 + 16732 mRNA_8364 0.89 0.7
1,044,764 + 16732 mRNA_8364 0.89 -2.9
1,044,807 - -0.5
1,045,044 - 0.5
1,045,050 - 0.8
1,045,062 - 1.5
1,045,073 - 1.8
1,045,073 + 0.2
1,045,080 + 2.5
1,045,081 - -0.4
1,045,082 + -0.1
1,045,084 - -0.6
1,045,090 + 1.2
1,045,101 - -0.3
1,045,128 + 0.1
1,045,217 - -0.9
1,045,226 + -0.6
1,045,234 - -2.3
1,045,237 + -1.6
1,045,273 + -1.5
1,045,380 + 16733 mRNA_8365 0.57 0.2
1,045,380 + 16733 mRNA_8365 0.57 -0.1
1,045,448 + 0.1
1,045,800 - 16734 mRNA_8366 0.14 2.2
1,045,977 + 16734 mRNA_8366 0.30 1.5
1,046,385 + 16734 mRNA_8366 0.66 2.2
1,046,824 - -0.3
1,046,839 - 0.4
1,046,850 - -1.6
1,046,852 + -1.3
1,046,865 + 0.3
1,046,922 + -0.5
1,046,973 - -0.1
1,047,021 - 0.5
1,047,029 - -0.1
1,047,177 + 16735 mRNA_8367 0.18 0.9
1,047,197 - 16735 mRNA_8367 0.19 0.6
1,047,608 + 16735 mRNA_8367 0.52 -0.9
1,047,638 - 16735 mRNA_8367 0.54 -1.7
1,047,732 + 16735 mRNA_8367 0.61 -1.8