Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8314

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8313: 16681 - K11541 URA2 carbamoyl-phosphate synthase / aspartate carbamoyltransferase, at 909559 to 916766 16681 mRNA_8314: 16682 - K03321 TC.SULP sulfate permease, SulP family, at 917700 to 921050 16682 mRNA_8315: 16683 - Hypothetical Protein, at 921677 to 922300 16683

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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916,992 - -0.9
916,998 + 0.2
917,000 + -2.1
917,014 + -1.5
917,141 + -1.7
917,143 - 0.5
917,147 - -0.8
917,159 + 1.7
917,169 + 0.4
917,171 + -0.6
917,198 + -0.3
917,304 + -0.6
917,331 - 0.8
917,331 + 2.2
917,356 - -1.9
917,439 + 1.1
917,442 - 1.2
917,445 + 0.5
917,446 - -2.2
917,453 - 0.7
917,460 - -0.2
917,493 - -0.4
917,493 - 0.4
917,495 + 0.6
917,498 - 0.8
917,499 + 0.4
917,502 - 0.6
917,506 + -0.7
917,514 - 0.5
917,573 + -0.1
917,649 - -0.2
917,918 - -0.0
918,097 + 16682 mRNA_8314 0.12 0.4
918,102 - 16682 mRNA_8314 0.12 -0.4
918,369 - 16682 mRNA_8314 0.20 -0.3
918,507 + 16682 mRNA_8314 0.24 -0.7
918,666 - 16682 mRNA_8314 0.29 -0.8
918,800 - 16682 mRNA_8314 0.33 0.3
918,802 - 16682 mRNA_8314 0.33 1.8
918,809 + 16682 mRNA_8314 0.33 -0.8
919,083 + 16682 mRNA_8314 0.41 0.3
919,664 - 16682 mRNA_8314 0.59 0.5
919,807 - 16682 mRNA_8314 0.63 0.1
920,120 + 16682 mRNA_8314 0.72 1.3
920,278 + 16682 mRNA_8314 0.77 0.5
920,430 + 16682 mRNA_8314 0.81 0.4
920,566 - 16682 mRNA_8314 0.86 1.4
921,186 + -0.2
921,490 + 0.4
921,619 - 0.2
921,631 - 1.0
921,643 - 0.5