Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8288

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8287: 16655 - K10245 ELO2 fatty acid elongase 2, at 850853 to 852932 16655 mRNA_8288: 16656 - KOG4135 Predicted phosphoglucosamine acetyltransferase, at 853502 to 854309 16656

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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853,395 + -0.9
853,710 + 16656 mRNA_8288 0.26 0.1
853,762 + 16656 mRNA_8288 0.32 -1.0
854,023 - 16656 mRNA_8288 0.64 -0.6
854,061 + 16656 mRNA_8288 0.69 0.2
854,061 + 16656 mRNA_8288 0.69 0.5
854,169 - 16656 mRNA_8288 0.83 1.4
854,173 + 16656 mRNA_8288 0.83 0.9
854,201 + 16656 mRNA_8288 0.87 0.4
854,335 + 0.5
854,344 + -0.5
854,372 + -1.0
854,384 + -0.8
854,502 + 1.1
854,528 + -2.0
854,553 + -0.8
854,564 - 0.8
854,565 - -2.1
854,569 + -2.8
854,571 + 0.6
854,573 + -0.1
854,575 - 0.7
854,717 - -2.5
854,730 - -0.2
854,741 + -1.9
854,883 + 0.1
855,028 + -0.1