Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8264

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8263: 16631 - KOG1432 Predicted DNA repair exonuclease SIA1, at 797648 to 800551 16631 mRNA_8264: 16632 - KOG4754 Predicted phosphoglycerate mutase, at 800850 to 802295 16632 mRNA_8265: 16633 - KOG0444 Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats), at 802560 to 804214 16633

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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800,021 - 16631 mRNA_8263 0.82 -0.8
800,035 + 16631 mRNA_8263 0.82 0.0
800,188 + 16631 mRNA_8263 0.87 0.2
800,300 - -0.4
800,626 - 0.1
800,648 + 0.9
801,024 + 16632 mRNA_8264 0.12 0.8
801,195 + 16632 mRNA_8264 0.24 -0.5
801,226 - 16632 mRNA_8264 0.26 4.0
801,639 + 16632 mRNA_8264 0.55 -0.2
801,816 - 16632 mRNA_8264 0.67 0.3
801,937 - 16632 mRNA_8264 0.75 -0.8
802,096 - 16632 mRNA_8264 0.86 -0.8
802,262 + 0.8
802,392 + -0.4
802,528 + 0.6
802,826 + 16633 mRNA_8265 0.16 1.4
802,987 + 16633 mRNA_8265 0.26 -0.0