Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8243

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8242: 16610 - KOG3319 Predicted membrane protein, at 746940 to 748080 16610 mRNA_8243: 16611 - K08739 MLH3 DNA mismatch repair protein MLH3, at 748481 to 751637 16611 mRNA_8244: 16612 - K14786 KRI1 protein KRI1, at 751805 to 754209 16612

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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748,215 - 0.3
748,215 - -2.3
748,516 - 0.7
748,640 - 0.7
748,682 + -0.1
749,068 + 16611 mRNA_8243 0.19 -0.1
749,205 + 16611 mRNA_8243 0.23 -2.5
749,425 - 16611 mRNA_8243 0.30 -0.2
750,700 - 16611 mRNA_8243 0.70 0.6
750,705 + 16611 mRNA_8243 0.70 0.6
751,145 + 16611 mRNA_8243 0.84 -1.7
751,148 + 16611 mRNA_8243 0.84 -0.0
751,152 + 16611 mRNA_8243 0.85 0.8
751,248 - 16611 mRNA_8243 0.88 1.4
751,425 - -0.4
751,550 - 0.8
751,574 + 0.3
751,685 - 0.1
751,697 - -0.8