Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8229

Experiments: YNB Ricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8228: 16596 - K11648 SMARCB1, SNF5, INI1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, at 716200 to 719512 16596 mRNA_8229: 16597 - K04630 GNAI guanine nucleotide-binding protein G(i) subunit alpha, at 720080 to 721710 16597 mRNA_8230: 16598 - K09668 LARGE glycosyltransferase-like protein LARGE, at 722627 to 724673 16598

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
remove
719,217 - -0.2
719,536 - -0.6
719,644 - -0.3
719,645 - 0.5
719,647 - 0.6
719,647 - 0.0
719,669 + 0.5
719,800 + -0.0
719,939 + -0.8
719,939 + -0.0
720,213 - 0.3
720,218 - 1.6
720,236 - -1.4
720,522 - 16597 mRNA_8229 0.27 0.3
720,539 + 16597 mRNA_8229 0.28 0.8
720,655 + 16597 mRNA_8229 0.35 0.7
720,741 + 16597 mRNA_8229 0.41 -0.0
720,955 + 16597 mRNA_8229 0.54 1.1
720,998 + 16597 mRNA_8229 0.56 -0.3
721,074 - 16597 mRNA_8229 0.61 -0.2
721,350 + 16597 mRNA_8229 0.78 0.4
721,353 - 16597 mRNA_8229 0.78 -1.5
721,485 + 16597 mRNA_8229 0.86 0.8
721,755 - -0.4
721,764 + 0.0
721,789 + -1.3
721,790 - 0.9
721,798 + 1.7
721,798 + 0.6
721,800 + 0.8
721,803 - 1.6
721,810 - 0.2
721,817 + 0.9
721,886 + -1.7
721,890 - 0.8
721,942 - 0.4
721,949 + -0.2
721,955 - -0.5
721,960 - -0.8
721,967 + -1.3
721,977 + 0.6
722,068 - -0.9
722,076 + 0.4
722,078 + -0.8
722,079 + 0.1
722,079 + 0.3
722,092 - -0.0
722,098 - -0.1
722,099 + -0.1
722,099 - 0.9
722,107 - 2.3
722,109 - 1.5
722,115 - 0.7
722,116 + -0.4
722,116 + 0.6
722,154 - -1.5
722,156 + -0.6
722,156 - -1.2
722,157 + 1.0
722,173 - -0.6
722,178 + -0.8
722,179 + -0.2
722,183 + -1.0
722,184 + 1.4
722,184 + 0.1
722,187 - -0.8
722,189 + -2.0
722,194 - -0.3
722,197 + 0.1
722,198 + -0.4
722,201 + -0.9
722,204 - -0.6
722,212 - 0.3
722,222 - -2.2
722,225 - 0.1
722,238 + 0.5
722,265 + 0.7
722,270 - -0.5
722,278 - 0.2
722,285 + -0.2
722,290 + -0.2
722,310 - 2.4
722,346 + -1.6
722,384 - -0.1
722,397 + 0.1
722,411 - -1.0
722,412 + 0.9
722,420 - -0.3
722,421 + 1.1
722,431 + 1.6
722,432 + -0.1
722,434 - 2.1