Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8225

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8224: 16592 - K00948 PRPS, prsA ribose-phosphate pyrophosphokinase, at 709564 to 711429 16592 mRNA_8225: 16593 - HMMPfam-DSBA-like thioredoxin domain-PF01323,SUPERFAMILY--SSF52833, at 711695 to 712857 16593

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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711,879 - 16593 mRNA_8225 0.16 1.0
712,125 - 16593 mRNA_8225 0.37 -1.5
712,450 - 16593 mRNA_8225 0.65 0.9
712,610 - 16593 mRNA_8225 0.79 1.9
712,872 - -3.0
712,873 + -0.2
712,875 + -2.0
712,878 + 0.4
712,884 + 0.6
712,895 + 0.5
712,980 - -2.4
712,984 + -1.9
713,070 + -1.0
713,077 - 0.1
713,083 - 0.2
713,097 + -0.4
713,125 + 0.2
713,515 - -0.1