Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8209

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8208: 16576 - BLAST putative Rho guanyl-nucleotide exchange factor [Rhodo..., at 672999 to 674159 16576 mRNA_8209: 16577 - K17618 UBLCP1 ubiquitin-like domain-containing CTD phosphatase 1, at 674405 to 676070 16577 mRNA_8210: 16578 - BLAST WetA [Penicillium camemberti], at 676267 to 678027 16578

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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673,650 - 16576 mRNA_8208 0.56 -1.6
673,796 + 16576 mRNA_8208 0.69 0.2
674,701 + 16577 mRNA_8209 0.18 -0.6
674,843 - 16577 mRNA_8209 0.26 -0.4
675,373 - 16577 mRNA_8209 0.58 -0.1
675,672 - 16577 mRNA_8209 0.76 0.8
675,689 + 16577 mRNA_8209 0.77 1.9
675,805 - 16577 mRNA_8209 0.84 0.4
675,818 - 16577 mRNA_8209 0.85 -0.0
675,822 + 16577 mRNA_8209 0.85 0.4
675,966 - 0.7
675,975 - -0.6
676,113 - -2.0
676,117 - -0.0
676,121 + 1.2
676,125 - 2.1
676,132 + 1.5
676,134 - -2.1
676,157 + 1.3
676,157 - 0.6
676,458 + 16578 mRNA_8210 0.11 -0.8
676,878 - 16578 mRNA_8210 0.35 0.5