Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8197

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8197: 16565 - KOG2922 Uncharacterized conserved protein, at 652238 to 654491 16565 mRNA_8198: 16566 - K03190 ureD, ureH urease accessory protein, at 654718 to 655775 16566

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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651,355 - -0.6
651,363 - -1.3
651,367 + 0.9
651,378 - 0.2
651,390 + 1.3
651,517 + 0.8
651,532 - -1.4
651,930 - 1.0
651,945 + 0.7
651,950 + 1.0
652,078 - 1.6
652,378 - 0.2
652,381 + 1.8
652,389 - 0.4
652,398 + 1.0
652,507 - 16565 mRNA_8197 0.12 -2.3
652,673 - 16565 mRNA_8197 0.19 0.1
652,676 + 16565 mRNA_8197 0.19 -1.5
652,680 - 16565 mRNA_8197 0.20 -0.2
653,099 + 16565 mRNA_8197 0.38 1.0
653,158 + 16565 mRNA_8197 0.41 0.0
653,870 + 16565 mRNA_8197 0.72 0.2
654,270 - 2.7
654,283 - -0.2
654,573 - -0.4
654,578 + -2.2
654,578 + 0.0
654,726 + 0.2
654,737 - 2.1
654,743 - 0.6
654,745 + 1.3
655,018 + 16566 mRNA_8198 0.28 2.9
655,024 - 16566 mRNA_8198 0.29 -0.7
655,181 - 16566 mRNA_8198 0.44 0.3