Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8140

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8139: 16507 - K01139 spoT, HDDC3 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase, at 509423 to 510293 16507 mRNA_8140: 16508 - Hypothetical Protein, at 510468 to 511367 16508 mRNA_8141: 16509 - Hypothetical Protein, at 511891 to 512782 16509

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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509,556 + 16507 mRNA_8139 0.15 -1.1
509,841 - 16507 mRNA_8139 0.48 0.2
510,001 + 16507 mRNA_8139 0.66 0.8
510,040 + 16507 mRNA_8139 0.71 1.9
510,423 + -1.0
510,735 - 16508 mRNA_8140 0.30 -0.4
510,757 + 16508 mRNA_8140 0.32 0.3
510,985 + 16508 mRNA_8140 0.57 0.1
511,114 - 16508 mRNA_8140 0.72 1.4
511,183 + 16508 mRNA_8140 0.79 0.3
511,306 - 0.1
511,313 + 1.1
511,318 - 0.8
511,934 + -0.8
512,073 + 16509 mRNA_8141 0.20 -0.4
512,361 + 16509 mRNA_8141 0.53 1.8