Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8118

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8117: 16485 - K06041 kdsD, kpsF arabinose-5-phosphate isomerase, at 455080 to 456482 16485 mRNA_8118: 16486 - Hypothetical Protein, at 456909 to 458986 16486 mRNA_8119: 16487 - Hypothetical Protein, at 459282 to 461489 16487

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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455,910 + 16485 mRNA_8117 0.59 1.7
456,205 - 16485 mRNA_8117 0.80 1.3
456,467 + 0.2
456,639 - -1.7
456,807 - -0.9
457,275 + 16486 mRNA_8118 0.18 0.3
457,276 - 16486 mRNA_8118 0.18 -0.2
457,568 - 16486 mRNA_8118 0.32 2.4
457,691 + 16486 mRNA_8118 0.38 -1.7
457,696 - 16486 mRNA_8118 0.38 -0.5
459,022 - 2.3