Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8106

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8105: 16473 - Hypothetical Protein, at 424921 to 425494 16473 mRNA_8106: 16474 - K13511 TAZ monolysocardiolipin acyltransferase, at 425625 to 426745 16474 mRNA_8107: 16475 - K01937 pyrG, CTPS CTP synthase, at 427104 to 429524 16475

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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424,626 - -0.5
424,660 - -0.3
424,660 - -0.2
424,676 + -2.7
424,692 + 0.3
424,698 + -0.7
424,700 - -2.3
424,709 - -1.1
424,714 - 1.0
424,721 - -0.7
424,732 + 0.0
424,733 + 0.4
424,739 + -1.7
424,750 - 0.3
424,751 + -0.4
424,753 + -1.9
424,755 - -0.0
424,756 + 1.0
424,757 + -0.0
424,761 - -0.3
424,762 + -0.8
424,764 + 0.0
424,768 + -0.2
424,772 + -0.6
424,775 - 0.5
424,795 - 1.9
424,812 + 0.8
424,829 + 0.3
424,847 - -0.2
424,848 - -1.4
424,892 + 1.6
424,899 + -1.2
424,906 + -0.9
424,910 - 0.4
424,913 + 1.2
424,918 - -0.2
424,952 + -0.9
424,971 - 1.3
425,036 + 16473 mRNA_8105 0.20 -0.3
425,039 + 16473 mRNA_8105 0.21 1.0
425,117 + 16473 mRNA_8105 0.34 -1.1
425,175 + 16473 mRNA_8105 0.44 1.8
425,194 + 16473 mRNA_8105 0.48 -0.6
425,194 - 16473 mRNA_8105 0.48 -0.6
425,199 - 16473 mRNA_8105 0.48 1.1
425,202 - 16473 mRNA_8105 0.49 -0.2
425,218 + 16473 mRNA_8105 0.52 -0.5
425,246 - 16473 mRNA_8105 0.57 -0.7
425,308 - 16473 mRNA_8105 0.67 -3.0
425,341 - 16473 mRNA_8105 0.73 0.1
425,343 - 16473 mRNA_8105 0.74 -0.2
425,368 - 16473 mRNA_8105 0.78 -0.2
425,378 - 16473 mRNA_8105 0.80 0.2
425,385 + 16473 mRNA_8105 0.81 -0.3
425,419 - 16473 mRNA_8105 0.87 1.0
425,426 - 16473 mRNA_8105 0.88 -0.1
425,497 - -3.3
425,512 - -0.7
425,527 + -0.9
425,528 + -0.4
425,572 + -0.3
425,620 - 0.4
425,699 - -3.3
425,701 - -0.6
425,709 + -1.3
425,719 + -3.5
425,741 - 16474 mRNA_8106 0.10 -3.1
425,752 - 16474 mRNA_8106 0.11 -2.2
425,801 + 16474 mRNA_8106 0.16 -0.6
425,832 + 16474 mRNA_8106 0.18 -1.3
425,833 - 16474 mRNA_8106 0.19 -2.2
425,896 + 16474 mRNA_8106 0.24 1.0
425,903 + 16474 mRNA_8106 0.25 -1.5
426,041 + 16474 mRNA_8106 0.37 -2.5
426,058 + 16474 mRNA_8106 0.39 -1.7
426,179 + 16474 mRNA_8106 0.49 -2.7
426,642 - -3.3
426,643 + -2.2
426,795 + -0.5
426,797 - 0.9
426,797 + -1.2
426,808 + 1.8