Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8098

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8097: 16465 - KOG0118 FOG RRM domain, at 413277 to 414722 16465 mRNA_8098: 16466 - Hypothetical Protein, at 415217 to 416223 16466 mRNA_8099: 16467 - HMMPfam-SUR7/PalI family-PF06687, at 416888 to 417757 16467

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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414,344 + 16465 mRNA_8097 0.74 0.7
414,356 + 16465 mRNA_8097 0.75 0.1
414,632 - 1.5
414,958 + 0.8
415,075 - -0.5
415,378 + 16466 mRNA_8098 0.16 -0.4
415,393 + 16466 mRNA_8098 0.17 -0.2
415,645 - 16466 mRNA_8098 0.43 0.8
415,936 - 16466 mRNA_8098 0.71 -0.7
416,125 + -2.1
416,323 - -0.9
416,324 + -0.7
416,337 - 0.6
416,402 + -1.7
416,414 + -1.6
416,426 + -0.6
416,454 - 0.5
416,509 + -0.0
416,511 - 0.5
416,531 - -0.0
416,543 - 0.7
416,562 - -0.2
416,563 - -0.6
416,568 + -1.4
416,576 + 2.3
416,578 - -0.8
416,591 + -0.2
416,700 + -0.9
416,702 - -0.1
416,718 - 0.8
416,862 + -1.5
416,875 - 0.3
417,005 + 16467 mRNA_8099 0.13 0.4