Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8084

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8083: 16451 - K17774 MDM10 mitochondrial distribution and morphology protein 10, at 379717 to 381351 16451 mRNA_8084: 16452 - K05351 E1.1.1.9 D-xylulose reductase, at 381463 to 383498 16452 mRNA_8085: 16453 - HMMPfam-Glycosyltransferase sugar-binding region containing DXD motif-PF04488,SUPERFAMILY--SSF53448, at 384174 to 386638 16453

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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381,561 - -0.5
382,183 - 16452 mRNA_8084 0.35 -2.0
382,303 - 16452 mRNA_8084 0.41 -0.2
382,322 - 16452 mRNA_8084 0.42 0.2
382,340 + 16452 mRNA_8084 0.43 1.8
382,452 + 16452 mRNA_8084 0.49 -2.1
382,494 + 16452 mRNA_8084 0.51 0.3
383,062 - 16452 mRNA_8084 0.79 -1.8
383,161 - 16452 mRNA_8084 0.83 -0.4
383,183 + 16452 mRNA_8084 0.84 -0.1
383,490 - 0.2
383,491 + 0.7
383,507 + 0.5
383,616 + -1.7
383,621 + -0.6
383,621 + 0.3
383,636 + -0.8
383,639 + 0.5
383,640 - -0.5
383,642 + -0.0
383,653 + 0.1
383,654 - -0.6
383,658 + -0.2
383,660 + -1.7
383,710 - -1.3
383,710 + 2.3
383,721 - 0.7
383,722 - 2.1
383,748 - 1.5
383,750 + 0.1
383,755 + -1.4
383,781 - 0.2
383,913 - 0.2
384,070 + -0.0
384,079 + 1.1