Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8076

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8076: 16444 - Hypothetical Protein, at 368382 to 369179 16444 mRNA_8077: 16445 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 369539 to 370935 16445

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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367,454 - 0.4
367,462 + 0.8
367,464 - 0.3
367,476 + 1.1
367,489 + 0.9
367,494 - 0.1
367,593 + -1.5
367,599 + 1.7
367,604 - 2.7
367,614 - 1.1
367,621 + 0.6
367,635 + -0.5
367,766 + -2.1
367,768 - -0.4
367,769 + 1.1
367,796 + -0.2
367,810 + 0.4
367,816 + -0.5
367,892 + 1.4
367,893 + 2.4
367,896 - 0.1
367,901 + -0.0
367,920 - -1.9
367,920 + -0.5
367,920 - -1.2
367,923 + -0.8
367,933 - -0.0
367,941 - -0.7
367,953 + -0.0
367,956 + -0.1
367,958 - 0.2
367,972 + -0.6
367,975 - -0.8
367,985 + -0.1
367,989 + 0.1
368,011 + -0.6
368,013 + -1.1
368,014 - 0.7
368,017 - 0.0
368,018 - 0.2
368,021 - -1.8
368,026 - -0.5
368,032 + 0.8
368,040 - -0.5
368,046 + -0.1
368,056 - -0.1
368,057 - -1.1
368,060 + 1.9
368,061 - 0.8
368,064 - 0.7
368,067 - 0.0
368,097 - 0.8
368,111 + -0.1
368,111 + -1.5
368,133 - 2.4
368,135 - -0.1
368,152 - -1.0
368,155 - 1.6
368,156 + 0.4
368,162 - 0.3
368,177 - 1.5
368,184 - -0.9
368,185 - 1.4
368,189 - 0.6
368,195 - -0.1
368,200 - -0.3
368,200 + 0.4
368,209 - 0.5
368,210 + 0.7
368,217 - -0.9
368,217 + 0.5
368,220 - 1.2
368,222 - 2.4
368,236 + 0.2
368,236 - 0.0
368,252 + 1.1
368,255 + 0.1
368,275 - -0.0
368,279 - 0.8
368,280 + 1.2
368,284 + -1.6
368,293 - -1.4
368,324 + 0.6
368,340 - 0.1
368,345 + 0.2
368,345 + 1.3
368,349 - -0.1
368,357 - -0.8
368,361 - -1.2
368,370 + -0.6
368,381 - 0.7
368,397 - 0.5
368,403 - 1.1
368,404 - 0.3
368,416 - 0.4
368,430 - 0.6
368,433 + 0.5
368,436 - -0.6
368,450 - -1.0
368,461 + -0.7
368,473 - 16444 mRNA_8076 0.11 0.3
368,485 - 16444 mRNA_8076 0.13 -0.2
368,495 - 16444 mRNA_8076 0.14 -0.8
368,500 + 16444 mRNA_8076 0.15 -0.2
368,506 + 16444 mRNA_8076 0.16 2.4
368,515 + 16444 mRNA_8076 0.17 0.6
368,528 - 16444 mRNA_8076 0.18 0.1
368,531 - 16444 mRNA_8076 0.19 0.9
368,553 + 16444 mRNA_8076 0.21 -0.4
368,564 + 16444 mRNA_8076 0.23 -0.2
368,574 - 16444 mRNA_8076 0.24 0.2
368,581 + 16444 mRNA_8076 0.25 0.4
368,584 + 16444 mRNA_8076 0.25 -0.4
368,585 - 16444 mRNA_8076 0.25 -0.1
368,595 - 16444 mRNA_8076 0.27 -0.6
368,596 + 16444 mRNA_8076 0.27 0.6
368,602 - 16444 mRNA_8076 0.28 0.0
368,606 - 16444 mRNA_8076 0.28 -1.4
368,607 + 16444 mRNA_8076 0.28 1.7
368,608 + 16444 mRNA_8076 0.28 -0.3
368,610 - 16444 mRNA_8076 0.29 0.5
368,611 + 16444 mRNA_8076 0.29 0.8
368,611 + 16444 mRNA_8076 0.29 -0.4
368,623 + 16444 mRNA_8076 0.30 0.5
368,624 - 16444 mRNA_8076 0.30 1.8
368,641 + 16444 mRNA_8076 0.32 -1.3
368,642 - 16444 mRNA_8076 0.33 -0.5
368,642 - 16444 mRNA_8076 0.33 -1.1
368,664 - 16444 mRNA_8076 0.35 -0.3
368,668 + 16444 mRNA_8076 0.36 0.7
368,678 - 16444 mRNA_8076 0.37 -1.1
368,693 - 16444 mRNA_8076 0.39 -1.5
368,693 + 16444 mRNA_8076 0.39 -0.5
368,696 + 16444 mRNA_8076 0.39 1.0
368,718 + 16444 mRNA_8076 0.42 -0.5
368,724 - 16444 mRNA_8076 0.43 -0.3
368,727 + 16444 mRNA_8076 0.43 -0.1
368,738 - 16444 mRNA_8076 0.45 0.7
368,743 + 16444 mRNA_8076 0.45 -0.5
368,744 - 16444 mRNA_8076 0.45 -1.1
368,745 + 16444 mRNA_8076 0.45 1.2
368,747 - 16444 mRNA_8076 0.46 -0.8
368,747 - 16444 mRNA_8076 0.46 0.6
368,763 - 16444 mRNA_8076 0.48 -0.7
368,765 + 16444 mRNA_8076 0.48 -1.0
368,766 + 16444 mRNA_8076 0.48 -1.6
368,769 - 16444 mRNA_8076 0.48 0.1
368,770 - 16444 mRNA_8076 0.49 -0.9
368,774 - 16444 mRNA_8076 0.49 -0.2
368,775 + 16444 mRNA_8076 0.49 1.2
368,775 + 16444 mRNA_8076 0.49 -2.1
368,775 + 16444 mRNA_8076 0.49 1.3
368,776 - 16444 mRNA_8076 0.49 1.9
368,779 - 16444 mRNA_8076 0.50 0.6
368,786 + 16444 mRNA_8076 0.51 -0.3
368,788 + 16444 mRNA_8076 0.51 1.5
368,796 + 16444 mRNA_8076 0.52 -0.3
368,796 + 16444 mRNA_8076 0.52 -0.6
368,817 - 16444 mRNA_8076 0.55 0.8
368,881 + 16444 mRNA_8076 0.63 -0.0
368,912 + 16444 mRNA_8076 0.66 1.7
368,918 + 16444 mRNA_8076 0.67 -0.7
368,928 + 16444 mRNA_8076 0.68 0.1
368,932 + 16444 mRNA_8076 0.69 0.5
368,932 + 16444 mRNA_8076 0.69 -0.3
368,936 - 16444 mRNA_8076 0.69 0.1
368,938 - 16444 mRNA_8076 0.70 0.4
368,940 - 16444 mRNA_8076 0.70 0.2
368,940 - 16444 mRNA_8076 0.70 1.1
368,943 - 16444 mRNA_8076 0.70 1.3
368,943 - 16444 mRNA_8076 0.70 1.5
368,949 - 16444 mRNA_8076 0.71 -1.4
368,949 - 16444 mRNA_8076 0.71 2.7
368,950 + 16444 mRNA_8076 0.71 2.2
368,955 + 16444 mRNA_8076 0.72 0.4
368,956 - 16444 mRNA_8076 0.72 0.2
368,956 + 16444 mRNA_8076 0.72 -1.8
368,956 + 16444 mRNA_8076 0.72 -0.9
368,958 - 16444 mRNA_8076 0.72 -0.5
368,958 + 16444 mRNA_8076 0.72 -0.9
368,959 + 16444 mRNA_8076 0.72 -0.8
368,961 - 16444 mRNA_8076 0.73 0.7
368,969 - 16444 mRNA_8076 0.74 -0.6
368,974 + 16444 mRNA_8076 0.74 -0.3
368,979 - 16444 mRNA_8076 0.75 -0.0
368,982 + 16444 mRNA_8076 0.75 1.4
368,984 + 16444 mRNA_8076 0.75 0.8
368,988 - 16444 mRNA_8076 0.76 -1.4
368,988 + 16444 mRNA_8076 0.76 0.6
368,989 - 16444 mRNA_8076 0.76 0.9
369,001 + 16444 mRNA_8076 0.78 0.7
369,045 - 16444 mRNA_8076 0.83 0.2
369,049 + 16444 mRNA_8076 0.84 0.4
369,058 - 16444 mRNA_8076 0.85 -1.0
369,059 - 16444 mRNA_8076 0.85 0.5
369,073 + 16444 mRNA_8076 0.87 -0.0
369,075 - 16444 mRNA_8076 0.87 0.9
369,080 + 16444 mRNA_8076 0.87 2.2
369,084 + 16444 mRNA_8076 0.88 -0.2
369,110 + 0.5
369,170 - 0.8
369,203 - 0.2
369,207 - 2.1
369,211 + 0.8
369,213 - 0.4
369,242 + -0.7
369,259 + -1.3
369,272 - -0.7
369,286 + -2.9
369,323 + 1.0
369,330 - 0.9
369,331 + -0.5
369,337 - -0.1
369,339 - 1.2
369,343 + 0.4
369,343 - -0.5
369,345 + -2.5
369,348 + -1.5
369,349 + -0.8
369,354 + -0.4
369,354 - 0.8
369,355 - -0.8
369,355 + 0.8
369,359 - 0.4
369,361 + 1.4
369,366 + -0.5
369,366 + -2.7
369,366 + -0.4
369,370 + 0.6
369,370 + -0.2
369,371 - 0.7
369,372 - 2.2
369,372 - 0.4
369,372 + 0.3
369,373 - -0.3
369,373 - 0.7
369,375 - -0.5
369,375 + 0.8
369,376 + -0.5
369,382 + -1.8
369,394 - -0.3
369,407 - 0.9
369,511 + -2.6
369,514 - -0.4
369,514 - -2.1
369,518 - -0.7
369,529 - -0.0
369,534 - -1.1
369,536 - 0.3
369,540 + -2.2
369,547 - -1.6
369,549 + -0.1
369,560 - 0.1
369,561 - 0.7
369,618 - -0.3
369,639 + 0.3
369,684 - 16445 mRNA_8077 0.10 0.1
369,689 - 16445 mRNA_8077 0.11 -1.5
369,695 + 16445 mRNA_8077 0.11 0.9
369,709 + 16445 mRNA_8077 0.12 -0.2
369,711 + 16445 mRNA_8077 0.12 -0.4
369,718 - 16445 mRNA_8077 0.13 -0.7
369,731 - 16445 mRNA_8077 0.14 -2.3
369,740 + 16445 mRNA_8077 0.14 1.4
369,744 - 16445 mRNA_8077 0.15 0.5
369,745 + 16445 mRNA_8077 0.15 0.1
369,756 + 16445 mRNA_8077 0.16 -2.4
369,760 + 16445 mRNA_8077 0.16 -0.0
369,768 + 16445 mRNA_8077 0.16 0.3
369,771 + 16445 mRNA_8077 0.17 0.6
369,778 - 16445 mRNA_8077 0.17 -0.3
369,780 + 16445 mRNA_8077 0.17 2.2
369,792 + 16445 mRNA_8077 0.18 1.6
369,805 - 16445 mRNA_8077 0.19 0.8
369,822 - 16445 mRNA_8077 0.20 0.5
369,827 - 16445 mRNA_8077 0.21 -0.9
369,850 + 16445 mRNA_8077 0.22 -0.7
369,850 + 16445 mRNA_8077 0.22 -0.6
369,852 + 16445 mRNA_8077 0.22 -0.0
369,862 + 16445 mRNA_8077 0.23 -0.8
369,863 - 16445 mRNA_8077 0.23 1.4
369,863 - 16445 mRNA_8077 0.23 1.1
369,863 - 16445 mRNA_8077 0.23 -0.4
369,863 - 16445 mRNA_8077 0.23 -0.2
369,864 + 16445 mRNA_8077 0.23 0.8
369,866 + 16445 mRNA_8077 0.23 0.6
369,868 - 16445 mRNA_8077 0.24 -0.5
369,891 - 16445 mRNA_8077 0.25 -0.8
369,919 + 16445 mRNA_8077 0.27 1.1
369,929 - 16445 mRNA_8077 0.28 -1.0
369,956 + 16445 mRNA_8077 0.30 1.7
369,966 + 16445 mRNA_8077 0.31 0.0
369,979 - 16445 mRNA_8077 0.31 -0.4
369,990 - 16445 mRNA_8077 0.32 2.5
369,996 + 16445 mRNA_8077 0.33 1.5
370,020 + 16445 mRNA_8077 0.34 -1.8
370,030 - 16445 mRNA_8077 0.35 0.3
370,032 - 16445 mRNA_8077 0.35 -0.1
370,047 - 16445 mRNA_8077 0.36 0.5
370,048 + 16445 mRNA_8077 0.36 1.1
370,055 - 16445 mRNA_8077 0.37 -1.0
370,056 - 16445 mRNA_8077 0.37 0.3
370,057 + 16445 mRNA_8077 0.37 0.4
370,071 - 16445 mRNA_8077 0.38 0.0
370,073 - 16445 mRNA_8077 0.38 1.4
370,091 - 16445 mRNA_8077 0.40 -0.3
370,094 + 16445 mRNA_8077 0.40 0.2
370,096 - 16445 mRNA_8077 0.40 -1.1
370,101 + 16445 mRNA_8077 0.40 -0.0
370,102 - 16445 mRNA_8077 0.40 0.2
370,109 - 16445 mRNA_8077 0.41 -0.4
370,110 + 16445 mRNA_8077 0.41 0.9
370,118 + 16445 mRNA_8077 0.41 -0.7
370,138 + 16445 mRNA_8077 0.43 -0.0
370,141 + 16445 mRNA_8077 0.43 1.6
370,146 - 16445 mRNA_8077 0.43 -1.1
370,156 - 16445 mRNA_8077 0.44 -1.0
370,163 - 16445 mRNA_8077 0.45 0.8